MolNFT v1 · #422799 · protein
AlphaFold monomer V2.0 prediction for D-serine dehydratase (P00926)
P00926: “AlphaFold monomer V2.0 prediction for D-serine dehydratase (P00926)”. 2 pockets (best druggability 0.74). MolNFT v1 #422799 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P00926
- Type
- protein
- Length
- 442 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- D-serine dehydratase
- UniProt
- P00926
- Pockets
- 2 · best druggability 0.74
Structure
1 distinct chain · 54% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | D-serine dehydratase | protein | 442 | 54% helix, 13% strand | P00926 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 69 | 0.74 | 0.98 | 25 | empty |
| 2 | 50 | 0.27 | 0.75 | 17 | empty |
Compared structures
- 3SS7 · Crystal structure of holo D-serine dehydratase from escherichia COLI at 1.55 a resolution · an experimental structure of the same protein · chain A against X, TM-score 0.97
- 3SS7 · Crystal structure of holo D-serine dehydratase from Escherichia coli at 1.55 A resolution · an experimental structure of the same protein · chain A against X, TM-score 0.97
- 3SS9 · Crystal structure of holo D-serine dehydratase from Escherichia coli at 1.97 A resolution · an experimental structure of the same protein · chain A against X, TM-score 0.97
- 3SS9 · Crystal structure of holo D-serine dehydratase from escherichia COLI at 1.97 a resolution · an experimental structure of the same protein · chain A against X, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00926
- Elsewhere: UniProt P00926 · AlphaFold DB P00926
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