MolNFT v1 · #421550 · protein
AlphaFold monomer V2.0 prediction for sodium channel protein type 11 subunit alpha (O88457)
O88457: “AlphaFold monomer V2.0 prediction for sodium channel protein type 11 subunit alpha (O88457)”. 20 pockets (best druggability 0.85). MolNFT v1 #421550 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- O88457
- Type
- protein
- Length
- 1,765 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF8cD1d8d93E9783063700De244A6e3cf6A195579
- Molecule
- Sodium channel protein type 11 subunit alpha
- UniProt
- O88457
- Pockets
- 20 · best druggability 0.85
Structure
1 distinct chain · 61% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sodium channel protein type 11 subunit alpha | protein | 1765 | 61% helix, 3% strand | O88457 |
Pockets
20 pockets found on a 1 Å grid, 20 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 917 | 0.85 | 0.86 | 79 | empty |
| 2 | 1156 | 0.77 | 0.79 | 96 | empty |
| 3 | 1126 | 0.75 | 0.77 | 102 | empty |
| 4 | 582 | 0.70 | 0.79 | 58 | empty |
| 5 | 622 | 0.69 | 0.77 | 74 | empty |
Modifications
Observed in the structure: 6 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O88457
- Elsewhere: UniProt O88457 · AlphaFold DB O88457
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