MolNFT v1 · #420578 · protein

AlphaFold monomer V2.0 prediction for nuclease sbccd subunit C (P13458)

P13458: “AlphaFold monomer V2.0 prediction for nuclease sbccd subunit C (P13458)”. 3 pockets (best druggability 0.62). MolNFT v1 #420578 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: P13458
Type: protein
Length: 1,048 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xa290d73B7A96341BDEd15630a89ebdADF7F8CE86
Molecule: Nuclease sbccd subunit C
UniProt: P13458
Pockets: 3 · best druggability 0.62

Structure

1 distinct chain · 69% helix, 9% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Nuclease sbccd subunit C	protein	1048	69% helix, 9% strand	P13458

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	63	0.62	0.91	17	empty
2	75	0.36	0.76	13	empty
3	75	0.33	0.74	14	empty

Compared structures

7YZP · Hairpin-bound state of the E. coli Mre11-Rad50 (SbcCD) head complex bound to ADP and a… · an experimental structure of the same protein · chain A against D, TM-score 0.33

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P13458
Elsewhere: UniProt P13458 · AlphaFold DB P13458

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