MolNFT v1 · #401916 · protein

AlphaFold monomer V2.0 prediction for 30S ribosomal protein S1 (A0QYY6)

A0QYY6: “AlphaFold monomer V2.0 prediction for 30S ribosomal protein S1 (A0QYY6)”. 3 pockets (best druggability 0.59). MolNFT v1 #401916 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: A0QYY6
Type: protein
Length: 479 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x5BeA89782341f98147F2D811B063F91F0aE7D7bF
Molecule: 30S ribosomal protein S1
UniProt: A0QYY6
Pockets: 3 · best druggability 0.59

Structure

1 distinct chain · 30% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	30S ribosomal protein S1	protein	479	30% helix, 30% strand	A0QYY6

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	363	0.59	0.76	33	empty
2	71	0.34	0.75	16	empty
3	62	0.27	0.73	13	empty

Compared structures

8WI7 · Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH. · an experimental structure of the same protein · chain A against b, TM-score 0.29
4NNH · Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by… · an experimental structure of the same protein · chain A against A, TM-score 0.28
4NNH · Structural basis for targeting the ribosomal protein S1 of mycobacterium tuberculosis by… · an experimental structure of the same protein · chain A against A, TM-score 0.28

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0QYY6
Elsewhere: UniProt A0QYY6 · AlphaFold DB A0QYY6

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