AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit delta (P12464)

Structure

1 distinct chain · 40% helix, 5% strand (DSSP).

Compared structures

• 7F75 · Cryo-EM structure of spx-dependent transcription activation complex · an experimental structure of the same protein · chain A against L, TM-score 0.51
• 7F75 · Cryo-EM structure of Spx-dependent transcription activation complex · an experimental structure of the same protein · chain A against L, TM-score 0.51
• 8XA8 · Cryo-EM structure of Bacillus RNAP and HelD complex · an experimental structure of the same protein · chain A against I, TM-score 0.48
• 8XA7 · Cryo-EM structure of Bacillus subtilis RNAP,sigA and SPO1 gp33 complex · an experimental structure of the same protein · chain A against L, TM-score 0.47
• 2KRC · Solution structure of the N-terminal domain of bacillus subtilis delta subunit of RNA… · an experimental structure of the same protein · chain A against A, TM-score 0.44
• 2KRC · Solution structure of the N-terminal domain of Bacillus subtilis delta subunit of RNA… · an experimental structure of the same protein · chain A against A, TM-score 0.44
• 2M4K · Solution structure of the delta subunit of RNA polymerase from Bacillus subtilis · an experimental structure of the same protein · chain A against A, TM-score 0.44
• 2M4K · Solution structure of the delta subunit of RNA polymerase from bacillus subtilis · an experimental structure of the same protein · chain A against A, TM-score 0.44
• 4NC7 · N-terminal domain of delta-subunit of RNA polymerase complexed with I3C and nickel ions · an experimental structure of the same protein · chain A against A, TM-score 0.40
• 4NC7 · N-terminal domain of delta-subunit of RNA polymerase complexed with I3C and nickel ions · an experimental structure of the same protein · chain A against A, TM-score 0.40
• 4NC8 · N-terminal domain of delta-subunit of RNA polymerase complexed with nickel ions · an experimental structure of the same protein · chain A against A, TM-score 0.40
• 4NC8 · N-terminal domain of delta-subunit of RNA polymerase complexed with nickel ions · an experimental structure of the same protein · chain A against A, TM-score 0.40

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P12464
• Elsewhere: UniProt P12464 · AlphaFold DB P12464