MolNFT v1 · #388837 · protein

AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor rpod (Q8P4H2)

Q8P4H2: “AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor rpod (Q8P4H2)”. 5 pockets (best druggability 0.74). MolNFT v1 #388837 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q8P4H2
Type: protein
Length: 624 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x1e98BA8F2a6e99CF52e657421c066AE47B314812
Molecule: RNA polymerase sigma factor rpod
UniProt: Q8P4H2
Pockets: 5 · best druggability 0.74

Structure

1 distinct chain · 66% helix, 2% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	RNA polymerase sigma factor rpod	protein	624	66% helix, 2% strand	Q8P4H2

Pockets

5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	654	0.74	0.80	54	empty
2	402	0.63	0.78	41	empty
3	136	0.43	0.76	27	empty
4	104	0.39	0.75	16	empty
5	76	0.34	0.75	20	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8P4H2
Elsewhere: UniProt Q8P4H2 · AlphaFold DB Q8P4H2

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