MolNFT v1 · #388829 · protein

AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor rpod (Q4UJT1)

Q4UJT1: “AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor rpod (Q4UJT1)”. 7 pockets (best druggability 0.74). MolNFT v1 #388829 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q4UJT1
Type: protein
Length: 635 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
Molecule: RNA polymerase sigma factor rpod
UniProt: Q4UJT1
Pockets: 7 · best druggability 0.74

Structure

1 distinct chain · 64% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	RNA polymerase sigma factor rpod	protein	635	64% helix, 1% strand	Q4UJT1

Pockets

7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	762	0.74	0.79	69	empty
2	298	0.53	0.74	32	empty
3	121	0.52	0.81	19	empty
4	146	0.45	0.76	14	empty
5	83	0.44	0.80	22	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q4UJT1
Elsewhere: UniProt Q4UJT1 · AlphaFold DB Q4UJT1

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.