MolNFT v1 · #388823 · protein

AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor rpod (Q2K619)

Q2K619: “AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor rpod (Q2K619)”. 6 pockets (best druggability 0.72). MolNFT v1 #388823 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q2K619
Type: protein
Length: 685 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x6C482d01F32F98784942cF1f954fA8aEba65C2c1
Molecule: RNA polymerase sigma factor rpod
UniProt: Q2K619
Pockets: 6 · best druggability 0.72

Structure

1 distinct chain · 63% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	RNA polymerase sigma factor rpod	protein	685	63% helix, 1% strand	Q2K619

Pockets

6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	766	0.72	0.78	64	empty
2	489	0.69	0.80	53	empty
3	235	0.54	0.77	34	empty
4	110	0.37	0.74	16	empty
5	81	0.34	0.74	14	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q2K619
Elsewhere: UniProt Q2K619 · AlphaFold DB Q2K619

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