MolNFT v1 · #388811 · protein

AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor rpod (Q83BB6)

Q83BB6: “AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor rpod (Q83BB6)”. 5 pockets (best druggability 0.79). MolNFT v1 #388811 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q83BB6
Type: protein
Length: 698 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xf18fe12B070cdC0C52a8561c9578bA09cAa78F5F
Molecule: RNA polymerase sigma factor rpod
UniProt: Q83BB6
Pockets: 5 · best druggability 0.79

Structure

1 distinct chain · 58% helix, 2% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	RNA polymerase sigma factor rpod	protein	698	58% helix, 2% strand	Q83BB6

Pockets

5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1069	0.79	0.81	95	empty
2	66	0.38	0.79	11	empty
3	103	0.36	0.74	20	empty
4	76	0.34	0.74	14	empty
5	53	0.29	0.75	11	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q83BB6
Elsewhere: UniProt Q83BB6 · AlphaFold DB Q83BB6

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