MolNFT v1 · #387189 · protein

AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q4VZP1)

Q4VZP1: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q4VZP1)”. 16 pockets (best druggability 0.67). MolNFT v1 #387189 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q4VZP1
Type: protein
Length: 1,070 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x29F5a997C9c963C0f8d9eA83ae506aA675743654
Molecule: DNA-directed RNA polymerase subunit beta
UniProt: Q4VZP1
Pockets: 16 · best druggability 0.67

Structure

1 distinct chain · 31% helix, 27% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DNA-directed RNA polymerase subunit beta	protein	1070	31% helix, 27% strand	Q4VZP1

Pockets

16 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	422	0.67	0.79	38	empty
2	387	0.61	0.77	43	empty
3	312	0.61	0.78	38	empty
4	260	0.60	0.80	32	empty
5	78	0.55	0.86	19	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q4VZP1
Elsewhere: UniProt Q4VZP1 · AlphaFold DB Q4VZP1

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