Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q4VZP1)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q4VZP1
- Type
- protein
- Length
- 1,070 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x29F5a997C9c963C0f8d9eA83ae506aA675743654
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- Q4VZP1
- Pockets
- 16 · best druggability 0.67
Structure
1 distinct chain · 31% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1070 | 31% helix, 27% strand | Q4VZP1 |
Pockets
16 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 422 | 0.67 | 0.79 | 38 | empty |
| 2 | 387 | 0.61 | 0.77 | 43 | empty |
| 3 | 312 | 0.61 | 0.78 | 38 | empty |
| 4 | 260 | 0.60 | 0.80 | 32 | empty |
| 5 | 78 | 0.55 | 0.86 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4VZP1
- Elsewhere: UniProt Q4VZP1 · AlphaFold DB Q4VZP1
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