MolNFT v1 · #384947 · protein
AlphaFold monomer V2.0 prediction for RNA polymerase II subunit B1 ctd phosphatase RPAP2 (Q5I0E6)
Q5I0E6: “AlphaFold monomer V2.0 prediction for RNA polymerase II subunit B1 ctd phosphatase RPAP2 (Q5I0E6)”. 4 pockets (best druggability 0.59). MolNFT v1 #384947 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5I0E6
- Type
- protein
- Length
- 609 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- RNA polymerase II subunit B1 ctd phosphatase RPAP2
- UniProt
- Q5I0E6
- Pockets
- 4 · best druggability 0.59
Structure
1 distinct chain · 40% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase II subunit B1 ctd phosphatase RPAP2 | protein | 609 | 40% helix, 2% strand | Q5I0E6 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 245 | 0.59 | 0.79 | 27 | empty |
| 2 | 159 | 0.47 | 0.76 | 20 | empty |
| 3 | 88 | 0.39 | 0.77 | 17 | empty |
| 4 | 73 | 0.34 | 0.75 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5I0E6
- Elsewhere: UniProt Q5I0E6 · AlphaFold DB Q5I0E6
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