Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase II subunit B1 ctd phosphatase RPAP2 (Q5I0E6)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase II subunit B1 ctd… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5I0E6
- Type
- protein
- Length
- 609 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- RNA polymerase II subunit B1 ctd phosphatase RPAP2
- UniProt
- Q5I0E6
- Pockets
- 4 · best druggability 0.59
Structure
1 distinct chain · 40% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase II subunit B1 ctd phosphatase RPAP2 | protein | 609 | 40% helix, 2% strand | Q5I0E6 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 245 | 0.59 | 0.79 | 27 | empty |
| 2 | 159 | 0.47 | 0.76 | 20 | empty |
| 3 | 88 | 0.39 | 0.77 | 17 | empty |
| 4 | 73 | 0.34 | 0.75 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5I0E6
- Elsewhere: UniProt Q5I0E6 · AlphaFold DB Q5I0E6
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