MolNFT v1 · #384834 · protein

AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase I subunit RPA2 (Q54BM1)

Q54BM1: “AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase I subunit RPA2 (Q54BM1)”. 14 pockets (best druggability 0.82). MolNFT v1 #384834 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q54BM1
Type: protein
Length: 1,130 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x12036AF92D04543C69d73C1E0B95D813ddc5bfa1
Molecule: DNA-directed RNA polymerase I subunit RPA2
UniProt: Q54BM1
Pockets: 14 · best druggability 0.82

Structure

1 distinct chain · 31% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DNA-directed RNA polymerase I subunit RPA2	protein	1130	31% helix, 25% strand	Q54BM1

Pockets

14 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	767	0.82	0.85	71	empty
2	65	0.72	0.98	22	empty
3	467	0.68	0.79	37	empty
4	260	0.67	0.83	28	empty
5	83	0.61	0.89	22	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q54BM1
Elsewhere: UniProt Q54BM1 · AlphaFold DB Q54BM1

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