MolNFT v1 · #376297 · protein
AlphaFold monomer V2.0 prediction for 23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd (Q6LMS7)
Q6LMS7: “AlphaFold monomer V2.0 prediction for 23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd (Q6LMS7)”. 3 pockets (best druggability 0.66). MolNFT v1 #376297 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q6LMS7
- Type
- protein
- Length
- 466 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B9C1843C18E3Db57c90541Af4e30FE5153fE095
- Molecule
- 23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd
- UniProt
- Q6LMS7
- Pockets
- 3 · best druggability 0.66
Structure
1 distinct chain · 25% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd | protein | 466 | 25% helix, 31% strand | Q6LMS7 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 548 | 0.66 | 0.77 | 64 | empty |
| 2 | 214 | 0.57 | 0.79 | 39 | empty |
| 3 | 80 | 0.32 | 0.73 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6LMS7
- Elsewhere: UniProt Q6LMS7 · AlphaFold DB Q6LMS7
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