MolNFT v1 · #376057 · protein
AlphaFold monomer V2.0 prediction for translation initiation factor RLI1 (Q03195)
Q03195: “AlphaFold monomer V2.0 prediction for translation initiation factor RLI1 (Q03195)”. 9 pockets (best druggability 0.73). MolNFT v1 #376057 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q03195
- Type
- protein
- Length
- 608 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x61c4A405146A0B1058694fd31d36a7b50c9bCbd4
- Molecule
- Translation initiation factor RLI1
- UniProt
- Q03195
- Pockets
- 9 · best druggability 0.73
Structure
1 distinct chain · 35% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Translation initiation factor RLI1 | protein | 608 | 35% helix, 20% strand | Q03195 |
Pockets
9 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 791 | 0.73 | 0.78 | 95 | empty |
| 2 | 200 | 0.48 | 0.75 | 33 | empty |
| 3 | 116 | 0.43 | 0.76 | 19 | empty |
| 4 | 136 | 0.40 | 0.74 | 16 | empty |
| 5 | 91 | 0.36 | 0.75 | 15 | empty |
Compared structures
- 3J16 · Models of ribosome-bound Dom34p and Rli1p and their ribosomal binding partners · an experimental structure of the same protein · chain A against B, TM-score 0.92
- 3J16 · Models of ribosome-bound DOM34P and RLI1P and their ribosomal binding partners · an experimental structure of the same protein · chain A against B, TM-score 0.92
- 4CRM · Cryo-EM of a pre-recycling complex with ERF1 and ABCE1 · an experimental structure of the same protein · chain A against P, TM-score 0.91
- 4CRM · Cryo-EM of a pre-recycling complex with eRF1 and ABCE1 · an experimental structure of the same protein · chain A against P, TM-score 0.91
- 7A1G · Structure of a crosslinked yeast ABCE1-bound 43S pre-initiation complex · an experimental structure of the same protein · chain A against x, TM-score 0.72
- 6ZU9 · Structure of a yeast ABCE1-bound 48S initiation complex · an experimental structure of the same protein · chain A against k, TM-score 0.71
- 6ZCE · Structure of a yeast ABCE1-bound 43S pre-initiation complex · an experimental structure of the same protein · chain A against k, TM-score 0.71
- 5LL6 · Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation… · an experimental structure of the same protein · chain A against h, TM-score 0.67
- 5LL6 · Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation… · an experimental structure of the same protein · chain A against h, TM-score 0.67
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q03195
- Elsewhere: UniProt Q03195 · AlphaFold DB Q03195
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