AlphaFold monomer V2.0 prediction for 50S ribosomal protein L5 (Q50306)

Structure

1 distinct chain · 42% helix, 21% strand (DSSP).

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Compared structures

• 8P8B · Mycoplasma pneumoniae large ribosomal subunit in chloramphenicol-treated cells · an experimental structure of the same protein · chain A against d, TM-score 0.95
• 8P7X · Mycoplasma pneumoniae 70S ribosome in chloramphenicol-treated cells · an experimental structure of the same protein · chain A against d, TM-score 0.94
• 8P8W · Mycoplasma pneumoniae di-ribosome in chloramphenicol-treated cells (following 70S) · an experimental structure of the same protein · chain A against d, TM-score 0.94
• 8P8V · Mycoplasma pneumoniae di-ribosome in chloramphenicol-treated cells (leading 70S) · an experimental structure of the same protein · chain A against d, TM-score 0.94
• 8P7Y · Mycoplasma pneumoniae 70S ribosome with second S4 protein on large subunit · an experimental structure of the same protein · chain A against d, TM-score 0.94
• 7P6Z · Mycoplasma pneumoniae 70S ribosome in untreated cells · an experimental structure of the same protein · chain A against d, TM-score 0.92
• 7OOD · Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol- treated cells · an experimental structure of the same protein · chain A against d, TM-score 0.92
• 7OOD · Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cells · an experimental structure of the same protein · chain A against d, TM-score 0.92
• 7PAM · 70S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells · an experimental structure of the same protein · chain A against d, TM-score 0.91
• 7PAL · 70S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cells · an experimental structure of the same protein · chain A against d, TM-score 0.91
• 7PAO · 70S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells · an experimental structure of the same protein · chain A against d, TM-score 0.90
• 7PAJ · 70S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cells · an experimental structure of the same protein · chain A against d, TM-score 0.90

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q50306
• Elsewhere: UniProt Q50306 · AlphaFold DB Q50306