AlphaFold monomer V2.0 prediction for 50S ribosomal protein L4 (P60723)

Structure

1 distinct chain · 36% helix, 13% strand (DSSP).

Compared structures

• 8CGD · Clindamycin bound to the 50S subunit · an experimental structure of the same protein · chain A against e, TM-score 0.98
• 8R8M · 70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid… · an experimental structure of the same protein · chain A against e, TM-score 0.98
• 8QK7 · E167K RF2 on E. coli 70S release complex with UAA · an experimental structure of the same protein · chain A against D, TM-score 0.98
• 8R6C · 70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA. · an experimental structure of the same protein · chain A against e, TM-score 0.98
• 7N1P · Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation · an experimental structure of the same protein · chain A against LD, TM-score 0.98
• 8CGK · Lincomycin and Avilamycin bound to the 50S subunit · an experimental structure of the same protein · chain A against e, TM-score 0.97
• 7N31 · Elongating 70S ribosome complex in a post-translocation (POST) conformation · an experimental structure of the same protein · chain A against LD, TM-score 0.97
• 6QUL · Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidi… · an experimental structure of the same protein · chain A against E, TM-score 0.97
• 7N2U · Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation · an experimental structure of the same protein · chain A against LD, TM-score 0.97
• 7N2C · Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of… · an experimental structure of the same protein · chain A against LD, TM-score 0.97
• 7N2V · Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of… · an experimental structure of the same protein · chain A against LD, TM-score 0.97
• 6XZ7 · E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and… · an experimental structure of the same protein · chain A against E, TM-score 0.97

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P60723
• Elsewhere: UniProt P60723 · AlphaFold DB P60723