AlphaFold monomer V2.0 prediction for 60S ribosomal protein L30 (P62888)

Structure

1 distinct chain · 45% helix, 17% strand (DSSP).

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Compared structures

• 9C3H · Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site. · an experimental structure of the same protein · chain A against Lc, TM-score 0.85
• 6OLZ · Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP… · an experimental structure of the same protein · chain A against Ac, TM-score 0.85
• 6OLG · Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with… · an experimental structure of the same protein · chain A against Ac, TM-score 0.85
• 7OW7 · EIF6-bound large subunit of the human ribosome · an experimental structure of the same protein · chain A against W, TM-score 0.85
• 8G5Y · mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state) · an experimental structure of the same protein · chain A against Lc, TM-score 0.85
• 8A3D · Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound · an experimental structure of the same protein · chain A against W, TM-score 0.85
• 8GLP · mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus… · an experimental structure of the same protein · chain A against Lc, TM-score 0.85
• 8QYX · Human 60S ribosomal subunit · an experimental structure of the same protein · chain A against W1, TM-score 0.84
• 8YOO · Cryo-EM structure of the human 80S ribosome with 100 um Tigecycline · an experimental structure of the same protein · chain A against Lc, TM-score 0.84
• 7XNX · High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cells · an experimental structure of the same protein · chain A against Lc, TM-score 0.84
• 7XNY · High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cells · an experimental structure of the same protein · chain A against Lc, TM-score 0.84
• 8OHD · 60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native) · an experimental structure of the same protein · chain A against Lc, TM-score 0.84

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P62888
• Elsewhere: UniProt P62888 · AlphaFold DB P62888