AlphaFold monomer V2.0 prediction for 50S ribosomal protein L2 (Q72I07)

Structure

1 distinct chain · 10% helix, 28% strand (DSSP).

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Compared structures

• 4ZER · Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus… · an experimental structure of the same protein · chain A against 1D, TM-score 0.99
• 5J4D · E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop… · an experimental structure of the same protein · chain A against JB, TM-score 0.99
• 6B4V · Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosome · an experimental structure of the same protein · chain A against IB, TM-score 0.99
• 6BOH · Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound… · an experimental structure of the same protein · chain A against JB, TM-score 0.99
• 6BOK · E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome · an experimental structure of the same protein · chain A against E, TM-score 0.99
• 4V67 · Crystal structure of a translation termination complex formed with release factor RF2. · an experimental structure of the same protein · chain A against BD, TM-score 0.96
• 4V9K · 70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP… · an experimental structure of the same protein · chain A against BD, TM-score 0.96
• 4V9N · Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2. · an experimental structure of the same protein · chain A against BD, TM-score 0.96

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q72I07
• Elsewhere: UniProt Q72I07 · AlphaFold DB Q72I07