Research workbench
AlphaFold monomer V2.0 prediction for 50S ribosomal protein L2 (Q72I07)
Analyse AlphaFold monomer V2.0 prediction for 50S ribosomal protein L2 (Q72I07) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q72I07
- Type
- protein
- Length
- 276 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7FDF8b382C6a36A8772D1A265E8e480c7DF0A9C1
- Molecule
- 50S ribosomal protein L2
- UniProt
- Q72I07
- Pockets
- 1 · best druggability 0.50
Structure
1 distinct chain · 10% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 50S ribosomal protein L2 | protein | 276 | 10% helix, 28% strand | Q72I07 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 248 | 0.50 | 0.75 | 33 | empty |
Compared structures
- 4ZER · Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus… · an experimental structure of the same protein · chain A against 1D, TM-score 0.99
- 5V8I · Thermus thermophilus 70S ribosome lacking ribosomal protein uS17 · an experimental structure of the same protein · chain A against 1D, TM-score 0.99
- 6CFL · Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and… · an experimental structure of the same protein · chain A against 1D, TM-score 0.99
- 6CFK · Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM… · an experimental structure of the same protein · chain A against 1D, TM-score 0.99
- 6CFJ · Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM… · an experimental structure of the same protein · chain A against 1D, TM-score 0.99
- 5J4D · E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop… · an experimental structure of the same protein · chain A against JB, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q72I07
- Elsewhere: UniProt Q72I07 · AlphaFold DB Q72I07
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