MolNFT v1 · #364738 · protein
AlphaFold monomer V2.0 prediction for 50S ribosomal protein L2 (Q5JDH2)
Q5JDH2: “AlphaFold monomer V2.0 prediction for 50S ribosomal protein L2 (Q5JDH2)”. 2 pockets (best druggability 0.43). MolNFT v1 #364738 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5JDH2
- Type
- protein
- Length
- 239 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- 50S ribosomal protein L2
- UniProt
- Q5JDH2
- Pockets
- 2 · best druggability 0.43
Structure
1 distinct chain · 13% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 50S ribosomal protein L2 | protein | 239 | 13% helix, 24% strand | Q5JDH2 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 126 | 0.43 | 0.76 | 24 | empty |
| 2 | 67 | 0.26 | 0.72 | 18 | empty |
Compared structures
- 6TH6 · Cryo-EM Structure of T. kodakarensis 70S ribosome · an experimental structure of the same protein · chain A against BC, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5JDH2
- Elsewhere: UniProt Q5JDH2 · AlphaFold DB Q5JDH2
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