AlphaFold monomer V2.0 prediction for 50S ribosomal protein L25 (P9WHB5)

Structure

1 distinct chain · 24% helix, 41% strand (DSSP).

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Compared structures

• 7MT7 · Mtb 70S with P and E site tRNAs · an experimental structure of the same protein · chain A against V, TM-score 0.80
• 7MSC · Mtb 70SIC in complex with MtbEttA at Pre_R0 state · an experimental structure of the same protein · chain A against V, TM-score 0.80
• 7MT2 · Mtb 70S initiation complex · an experimental structure of the same protein · chain A against V, TM-score 0.80
• 7MSM · Mtb 70SIC in complex with MtbEttA at Trans_R0 state · an experimental structure of the same protein · chain A against V, TM-score 0.79
• 7MSH · Mtb 70SIC in complex with MtbEttA at Pre_R1 state · an experimental structure of the same protein · chain A against V, TM-score 0.79
• 7MT3 · Mtb 70S with P/E tRNA · an experimental structure of the same protein · chain A against V, TM-score 0.78
• 7MSZ · Mtb 70SIC in complex with MtbEttA at Trans_R1 state · an experimental structure of the same protein · chain A against V, TM-score 0.78
• 7KGB · CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9 · an experimental structure of the same protein · chain A against V, TM-score 0.43

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P9WHB5
• Elsewhere: UniProt P9WHB5 · AlphaFold DB P9WHB5