AlphaFold monomer V2.0 prediction for 60S ribosomal protein L18 (Q07020)

Structure

1 distinct chain · 34% helix, 16% strand (DSSP).

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Compared structures

• 7OW7 · EIF6-bound large subunit of the human ribosome · an experimental structure of the same protein · chain A against K, TM-score 0.98
• 8OHD · 60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native) · an experimental structure of the same protein · chain A against LQ, TM-score 0.98
• 8G5Y · mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state) · an experimental structure of the same protein · chain A against LQ, TM-score 0.98
• 8G60 · mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state) · an experimental structure of the same protein · chain A against LQ, TM-score 0.98
• 8G61 · mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state) · an experimental structure of the same protein · chain A against LQ, TM-score 0.98
• 8QYX · Human 60S ribosomal subunit · an experimental structure of the same protein · chain A against K1, TM-score 0.98
• 8UKB · In situ HHT and CHX treated human hibernating state without E-tRNA 80S ribosome · an experimental structure of the same protein · chain A against LQ, TM-score 0.98
• 8K2C · Cryo-EM structure of the human 80S ribosome with Tigecycline · an experimental structure of the same protein · chain A against LQ, TM-score 0.98
• 8OJ5 · 60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution) · an experimental structure of the same protein · chain A against LQ, TM-score 0.98
• 7XNX · High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cells · an experimental structure of the same protein · chain A against LQ, TM-score 0.98
• 7XNY · High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cells · an experimental structure of the same protein · chain A against LQ, TM-score 0.98
• 6LU8 · Cryo-EM structure of a human pre-60S ribosomal subunit - state A · an experimental structure of the same protein · chain A against Z, TM-score 0.98

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q07020
• Elsewhere: UniProt Q07020 · AlphaFold DB Q07020