MolNFT v1 · #332551 · protein

AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (C0Q5F4)

C0Q5F4: “AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (C0Q5F4)”. 14 pockets (best druggability 0.82). MolNFT v1 #332551 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: C0Q5F4
Type: protein
Length: 968 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x44D50E828c22812996CB99C7F2E0C5EC9933b478
Molecule: RNA polymerase-associated protein rapa
UniProt: C0Q5F4
Pockets: 14 · best druggability 0.82

Structure

1 distinct chain · 47% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	RNA polymerase-associated protein rapa	protein	968	47% helix, 18% strand	C0Q5F4

Pockets

14 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	472	0.82	0.90	65	empty
2	330	0.72	0.85	41	empty
3	193	0.59	0.82	24	empty
4	167	0.59	0.83	26	empty
5	106	0.52	0.82	25	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt C0Q5F4
Elsewhere: UniProt C0Q5F4 · AlphaFold DB C0Q5F4

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