MolNFT v1 · #332536 · protein

AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (Q3KGV8)

Q3KGV8: “AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (Q3KGV8)”. 9 pockets (best druggability 0.82). MolNFT v1 #332536 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q3KGV8
Type: protein
Length: 948 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xF8cD1d8d93E9783063700De244A6e3cf6A195579
Molecule: RNA polymerase-associated protein rapa
UniProt: Q3KGV8
Pockets: 9 · best druggability 0.82

Structure

1 distinct chain · 46% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	RNA polymerase-associated protein rapa	protein	948	46% helix, 19% strand	Q3KGV8

Pockets

9 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	960	0.82	0.83	114	empty
2	768	0.77	0.81	64	empty
3	670	0.71	0.79	70	empty
4	446	0.71	0.82	56	empty
5	188	0.51	0.77	28	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q3KGV8
Elsewhere: UniProt Q3KGV8 · AlphaFold DB Q3KGV8

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