MolNFT v1 · #331939 · protein
AlphaFold monomer V2.0 prediction for DNA repair and recombination protein RAD26 (P40352)
P40352: “AlphaFold monomer V2.0 prediction for DNA repair and recombination protein RAD26 (P40352)”. 7 pockets (best druggability 0.82). MolNFT v1 #331939 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P40352
- Type
- protein
- Length
- 1,085 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x696fbd2e2d1499E7c009274A815cA989Bda9ceaC
- Molecule
- DNA repair and recombination protein RAD26
- UniProt
- P40352
- Pockets
- 7 · best druggability 0.82
Structure
1 distinct chain · 52% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA repair and recombination protein RAD26 | protein | 1085 | 52% helix, 9% strand | P40352 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1011 | 0.82 | 0.83 | 104 | empty |
| 2 | 1086 | 0.78 | 0.80 | 82 | empty |
| 3 | 1074 | 0.78 | 0.79 | 90 | empty |
| 4 | 120 | 0.53 | 0.82 | 22 | empty |
| 5 | 75 | 0.37 | 0.77 | 16 | empty |
Compared structures
- 5VVR · Ternary complex of RNA pol II, transcription scaffold and RAD26 · an experimental structure of the same protein · chain A against M, TM-score 0.40
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P40352
- Elsewhere: UniProt P40352 · AlphaFold DB P40352
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