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AlphaFold monomer V2.0 prediction for DNA repair and recombination protein RAD26 (P40352)

Analyse AlphaFold monomer V2.0 prediction for DNA repair and recombination protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P40352
Type: protein
Length: 1,085 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x696fbd2e2d1499E7c009274A815cA989Bda9ceaC
Molecule: DNA repair and recombination protein RAD26
UniProt: P40352
Pockets: 7 · best druggability 0.82

Structure

1 distinct chain · 52% helix, 9% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DNA repair and recombination protein RAD26	protein	1085	52% helix, 9% strand	P40352

Pockets

7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1011	0.82	0.83	104	empty
2	1086	0.78	0.80	82	empty
3	1074	0.78	0.79	90	empty
4	120	0.53	0.82	22	empty
5	75	0.37	0.77	16	empty

Compared structures

5VVR · Ternary complex of RNA pol II, transcription scaffold and RAD26 · an experimental structure of the same protein · chain A against M, TM-score 0.40
5VVR · Ternary complex of RNA Pol II, transcription scaffold and Rad26 · an experimental structure of the same protein · chain A against M, TM-score 0.40

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P40352
Elsewhere: UniProt P40352 · AlphaFold DB P40352

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