MolNFT v1 · #325859 · protein
AlphaFold monomer V2.0 prediction for pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 (Q8WU10)
Q8WU10 · Pyridine nucleotide-disulfide oxidoreductase domain…: “AlphaFold monomer V2.0 prediction for pyridine nucleotide-disulfide oxidoreductase domain-containing protein…”. 7 pockets (best druggability 0.78). MolNFT v1 #325859 on…
- Accession
- Q8WU10
- Type
- protein
- Length
- 500 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- Pyridine nucleotide-disulfide oxidoreductase domain- containing protein 1
- UniProt
- Q8WU10
- Pockets
- 7 · best druggability 0.78
Structure
1 distinct chain · 22% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pyridine nucleotide-disulfide oxidoreductase domain- containing protein 1 | protein | 500 | 22% helix, 30% strand | Q8WU10 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 624 | 0.78 | 0.84 | 77 | empty |
| 2 | 263 | 0.60 | 0.79 | 29 | empty |
| 3 | 55 | 0.50 | 0.87 | 17 | empty |
| 4 | 166 | 0.48 | 0.77 | 28 | empty |
| 5 | 229 | 0.48 | 0.74 | 22 | empty |
Compared structures
- 8ORJ · Cryo-EM structure of human tRNA ligase RTCB in complex with human PYROXD1. · an experimental structure of the same protein · chain A against B, TM-score 0.83
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8WU10
- Elsewhere: UniProt Q8WU10 · AlphaFold DB Q8WU10
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