MolNFT v1 · #316219 · protein
AlphaFold monomer V2.0 prediction for P840 reaction center 17 kda protein (Q8KEP5)
Q8KEP5: “AlphaFold monomer V2.0 prediction for P840 reaction center 17 kda protein (Q8KEP5)”. 1 pocket (best druggability 0.57). MolNFT v1 #316219 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8KEP5
- Type
- protein
- Length
- 143 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- P840 reaction center 17 kda protein
- UniProt
- Q8KEP5
- Pockets
- 1 · best druggability 0.57
Structure
1 distinct chain · 19% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | P840 reaction center 17 kda protein | protein | 143 | 19% helix, 30% strand | Q8KEP5 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 295 | 0.57 | 0.77 | 38 | empty |
Compared structures
- 8GWA · Structure of the intact photosynthetic light-harvesting antenna-reaction center complex… · an experimental structure of the same protein · chain A against D, TM-score 0.75
- 7Z6Q · Cryo-EM structure of the whole photosynthetic complex from the green sulfur bacteria · an experimental structure of the same protein · chain A against D, TM-score 0.72
- 7UEB · Photosynthetic assembly of Chlorobaculum tepidum (RC-FMO2) · an experimental structure of the same protein · chain A against D, TM-score 0.42
- 7UEA · Photosynthetic assembly of Chlorobaculum tepidum (RC-FMO1) · an experimental structure of the same protein · chain A against D, TM-score 0.41
- 6M32 · Cryo-EM structure of fmo-rc complex from green sulfur bacteria · an experimental structure of the same protein · chain A against D, TM-score 0.41
- 6M32 · Cryo-EM structure of FMO-RC complex from green sulfur bacteria · an experimental structure of the same protein · chain A against D, TM-score 0.41
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8KEP5
- Elsewhere: UniProt Q8KEP5 · AlphaFold DB Q8KEP5
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