Research workbench
AlphaFold monomer V2.0 prediction for P840 reaction center 17 kda protein (Q8KEP5)
Analyse AlphaFold monomer V2.0 prediction for P840 reaction center 17 kda protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8KEP5
- Type
- protein
- Length
- 143 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- P840 reaction center 17 kda protein
- UniProt
- Q8KEP5
- Pockets
- 1 · best druggability 0.57
Structure
1 distinct chain · 19% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | P840 reaction center 17 kda protein | protein | 143 | 19% helix, 30% strand | Q8KEP5 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 295 | 0.57 | 0.77 | 38 | empty |
Compared structures
- 8GWA · Structure of the intact photosynthetic light-harvesting antenna-reaction center complex… · an experimental structure of the same protein · chain A against D, TM-score 0.75
- 7Z6Q · Cryo-EM structure of the whole photosynthetic complex from the green sulfur bacteria · an experimental structure of the same protein · chain A against D, TM-score 0.72
- 7UEB · Photosynthetic assembly of Chlorobaculum tepidum (RC-FMO2) · an experimental structure of the same protein · chain A against D, TM-score 0.42
- 7UEA · Photosynthetic assembly of Chlorobaculum tepidum (RC-FMO1) · an experimental structure of the same protein · chain A against D, TM-score 0.41
- 6M32 · Cryo-EM structure of fmo-rc complex from green sulfur bacteria · an experimental structure of the same protein · chain A against D, TM-score 0.41
- 6M32 · Cryo-EM structure of FMO-RC complex from green sulfur bacteria · an experimental structure of the same protein · chain A against D, TM-score 0.41
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8KEP5
- Elsewhere: UniProt Q8KEP5 · AlphaFold DB Q8KEP5
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