MolNFT v1 · #312328 · protein

AlphaFold monomer V2.0 prediction for photosystem I P700 chlorophyll a apoprotein A1 (P25936)

P25936: “AlphaFold monomer V2.0 prediction for photosystem I P700 chlorophyll a apoprotein A1 (P25936)”. 11 pockets (best druggability 0.69). MolNFT v1 #312328 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: P25936
Type: protein
Length: 755 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x79a905d858Ce72991FD6E7a9C6498620f42E146D
Molecule: Photosystem I P700 chlorophyll a apoprotein A1
UniProt: P25936
Pockets: 11 · best druggability 0.69

Structure

1 distinct chain · 60% helix, 5% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Photosystem I P700 chlorophyll a apoprotein A1	protein	755	60% helix, 5% strand	P25936

Pockets

11 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	807	0.69	0.75	72	empty
2	350	0.64	0.79	39	empty
3	263	0.56	0.76	28	empty
4	278	0.55	0.75	26	empty
5	313	0.55	0.75	33	empty

Compared structures

6K33 · Structure of PSI-isiA supercomplex from Thermosynechococcus vulcanus · an experimental structure of the same protein · chain A against aA, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P25936
Elsewhere: UniProt P25936 · AlphaFold DB P25936

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