MolNFT v1 · #312251 · protein

AlphaFold monomer V2.0 prediction for photosystem I P700 chlorophyll a apoprotein A1 (P04966)

P04966: “AlphaFold monomer V2.0 prediction for photosystem I P700 chlorophyll a apoprotein A1 (P04966)”. 12 pockets (best druggability 0.70). MolNFT v1 #312251 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: P04966
Type: protein
Length: 751 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x9C5cB57d1eDa7581935cB65276f4b016326De568
Molecule: Photosystem I P700 chlorophyll a apoprotein A1
UniProt: P04966
Pockets: 12 · best druggability 0.70

Structure

1 distinct chain · 61% helix, 5% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Photosystem I P700 chlorophyll a apoprotein A1	protein	751	61% helix, 5% strand	P04966

Pockets

12 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	622	0.70	0.77	62	empty
2	804	0.69	0.75	70	empty
3	287	0.58	0.77	41	empty
4	375	0.57	0.75	43	empty
5	282	0.56	0.76	29	empty

Compared structures

5ZJI · Structure of photosystem I supercomplex with light-harvesting complexes I and II · an experimental structure of the same protein · chain A against A, TM-score 0.98
5ZJI · Structure of photosystem I supercomplex with light-harvesting complexes I and II · an experimental structure of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P04966
Elsewhere: UniProt P04966 · AlphaFold DB P04966

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