MolNFT v1 · #299572 · protein

AlphaFold monomer V2.0 prediction for type IV pilus assembly protein pilc (Q1D0A0)

Q1D0A0: “AlphaFold monomer V2.0 prediction for type IV pilus assembly protein pilc (Q1D0A0)”. 3 pockets (best druggability 0.57). MolNFT v1 #299572 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q1D0A0
Type: protein
Length: 417 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x81FFd8C96E4A5454E3d65dFf78C1042d8fF7DAdA
Molecule: Type IV pilus assembly protein pilc
UniProt: Q1D0A0
Pockets: 3 · best druggability 0.57

Structure

1 distinct chain · 71% helix, 6% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Type IV pilus assembly protein pilc	protein	417	71% helix, 6% strand	Q1D0A0

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	252	0.57	0.78	29	empty
2	148	0.41	0.74	20	empty
3	63	0.32	0.75	13	empty

Compared structures

3JC8 · Architectural model of the type IVa pilus machine in a piliated state · an experimental structure of the same protein · chain A against Ca, TM-score 0.41
3JC9 · Architectural model of the type IVa pilus machine in a non-piliated state · an experimental structure of the same protein · chain A against Ca, TM-score 0.41

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q1D0A0
Elsewhere: UniProt Q1D0A0 · AlphaFold DB Q1D0A0

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.