MolNFT v1 · #292868 · protein
AlphaFold monomer V2.0 prediction for PDZ domain-containing protein 7 (Q9H5P4)
Q9H5P4: “AlphaFold monomer V2.0 prediction for PDZ domain-containing protein 7 (Q9H5P4)”. 7 pockets (best druggability 0.64). MolNFT v1 #292868 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9H5P4
- Type
- protein
- Length
- 1,033 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x13E88C248c9e8FD361F590BE0a618ae231254269
- Molecule
- PDZ domain-containing protein 7
- UniProt
- Q9H5P4
- Pockets
- 7 · best druggability 0.64
Structure
1 distinct chain · 18% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PDZ domain-containing protein 7 | protein | 1033 | 18% helix, 13% strand | Q9H5P4 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 428 | 0.64 | 0.78 | 42 | empty |
| 2 | 197 | 0.51 | 0.77 | 31 | empty |
| 3 | 105 | 0.39 | 0.76 | 18 | empty |
| 4 | 75 | 0.38 | 0.77 | 15 | empty |
| 5 | 54 | 0.33 | 0.77 | 16 | empty |
Compared structures
- 7PC5 · The third PDZ domain of PDZD7 complexed with the PDZ-binding motif of EXOC4 · an experimental structure of the same protein · chain A against A, TM-score 0.11
- 7PC5 · The third PDZ domain of PDZD7 complexed with the PDZ-binding motif of EXOC4 · an experimental structure of the same protein · chain A against A, TM-score 0.11
- 2EEH · Solution structure of first PDZ domain of PDZ domain containing protein 7 · an experimental structure of the same protein · chain A against A, TM-score 0.08
- 2EEH · Solution Structure of First PDZ domain of PDZ Domain Containing Protein 7 · an experimental structure of the same protein · chain A against A, TM-score 0.08
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9H5P4
- Elsewhere: UniProt Q9H5P4 · AlphaFold DB Q9H5P4
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