MolNFT v1 · #292081 · protein

AlphaFold monomer V2.0 prediction for pyridoxine 5'-phosphate synthase (Q3JQ80)

Q3JQ80: “AlphaFold monomer V2.0 prediction for pyridoxine 5'-phosphate synthase (Q3JQ80)”. 2 pockets (best druggability 0.58). MolNFT v1 #292081 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q3JQ80
Type: protein
Length: 257 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xB00e4078924fAA25591B0a231c32CcF455f85C70
Molecule: Pyridoxine 5'-phosphate synthase
UniProt: Q3JQ80
Pockets: 2 · best druggability 0.58

Structure

1 distinct chain · 47% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Pyridoxine 5'-phosphate synthase	protein	257	47% helix, 17% strand	Q3JQ80

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	248	0.58	0.79	29	empty
2	52	0.30	0.76	10	empty

Compared structures

3GK0 · Crystal structure of pyridoxal phosphate biosynthetic protein from burkholderia… · an experimental structure of the same protein · chain A against A, TM-score 0.95
3GK0 · Crystal structure of pyridoxal phosphate biosynthetic protein from Burkholderia… · an experimental structure of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q3JQ80
Elsewhere: UniProt Q3JQ80 · AlphaFold DB Q3JQ80

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.