MolNFT v1 · #291028 · protein
AlphaFold monomer V2.0 prediction for pyrimidine-nucleoside phosphorylase (Q5HE64)
Q5HE64: “AlphaFold monomer V2.0 prediction for pyrimidine-nucleoside phosphorylase (Q5HE64)”. 4 pockets (best druggability 0.77). MolNFT v1 #291028 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5HE64
- Type
- protein
- Length
- 433 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- Pyrimidine-nucleoside phosphorylase
- UniProt
- Q5HE64
- Pockets
- 4 · best druggability 0.77
Structure
1 distinct chain · 46% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pyrimidine-nucleoside phosphorylase | protein | 433 | 46% helix, 16% strand | Q5HE64 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 754 | 0.77 | 0.81 | 56 | empty |
| 2 | 68 | 0.37 | 0.78 | 14 | empty |
| 3 | 70 | 0.35 | 0.77 | 15 | empty |
| 4 | 58 | 0.30 | 0.75 | 19 | empty |
Compared structures
- 3H5Q · Crystal structure of a putative pyrimidine-nucleoside phosphorylase from Staphylococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 3H5Q · Crystal structure of a putative pyrimidine-nucleoside phosphorylase from staphylococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5HE64
- Elsewhere: UniProt Q5HE64 · AlphaFold DB Q5HE64
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