Research workbench

AlphaFold monomer V2.0 prediction for pyrimidine-nucleoside phosphorylase (Q5HE64)

Analyse AlphaFold monomer V2.0 prediction for pyrimidine-nucleoside phosphorylase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q5HE64
Type: protein
Length: 433 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
Molecule: Pyrimidine-nucleoside phosphorylase
UniProt: Q5HE64
Pockets: 4 · best druggability 0.77

Structure

1 distinct chain · 46% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Pyrimidine-nucleoside phosphorylase	protein	433	46% helix, 16% strand	Q5HE64

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	754	0.77	0.81	56	empty
2	68	0.37	0.78	14	empty
3	70	0.35	0.77	15	empty
4	58	0.30	0.75	19	empty

Compared structures

3H5Q · Crystal structure of a putative pyrimidine-nucleoside phosphorylase from Staphylococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.98
3H5Q · Crystal structure of a putative pyrimidine-nucleoside phosphorylase from staphylococcus… · an experimental structure of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5HE64
Elsewhere: UniProt Q5HE64 · AlphaFold DB Q5HE64

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.