MolNFT v1 · #288896 · protein
AlphaFold monomer V2.0 prediction for protein polybromo-1 (Q8BSQ9)
Q8BSQ9: “AlphaFold monomer V2.0 prediction for protein polybromo-1 (Q8BSQ9)”. 15 pockets (best druggability 0.74). MolNFT v1 #288896 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8BSQ9
- Type
- protein
- Length
- 1,634 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0356e122c1fF1b685d1f6dBC2f0B9adCa50B5286
- Molecule
- Protein polybromo-1
- UniProt
- Q8BSQ9
- Pockets
- 15 · best druggability 0.74
Structure
1 distinct chain · 37% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein polybromo-1 | protein | 1634 | 37% helix, 11% strand | Q8BSQ9 |
Pockets
15 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 710 | 0.74 | 0.80 | 64 | empty |
| 2 | 518 | 0.65 | 0.76 | 60 | empty |
| 3 | 430 | 0.62 | 0.77 | 39 | empty |
| 4 | 85 | 0.53 | 0.84 | 16 | empty |
| 5 | 217 | 0.52 | 0.76 | 18 | empty |
Compared structures
- 2YQD · Solution structure of the fifth bromodomain from mouse polybromo-1 · an experimental structure of the same protein · chain A against A, TM-score 0.07
- 2YQD · Solution structure of the fifth bromodomain from mouse polybromo-1 · an experimental structure of the same protein · chain A against A, TM-score 0.07
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8BSQ9
- Elsewhere: UniProt Q8BSQ9 · AlphaFold DB Q8BSQ9
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.