GL1X · GenesisL1 explorer

MolNFT v1 · #285981 · protein

AlphaFold monomer V2.0 prediction for lipid a palmitoyltransferase pagp (P37001)

P37001: “AlphaFold monomer V2.0 prediction for lipid a palmitoyltransferase pagp (P37001)”. 1 pocket (best druggability 0.68). MolNFT v1 #285981 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession
P37001
Type
protein
Length
186 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0xB44F19a0cb161828322eEEd13F55d4C3C34938d2
Molecule
Lipid a palmitoyltransferase pagp
UniProt
P37001
Pockets
1 · best druggability 0.68

Structure

1 distinct chain · 27% helix, 47% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ALipid a palmitoyltransferase pagpprotein18627% helix, 47% strandP37001

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12150.680.8539empty

Compared structures

  • 3GP6 · Crystal structure of pagp in SDS/MPD · an experimental structure of the same protein · chain A against A, TM-score 0.79
  • 3GP6 · Crystal structure of PagP in SDS/MPD · an experimental structure of the same protein · chain A against A, TM-score 0.79
  • 1THQ · Crystal Structure of Outer Membrane Enzyme PagP · an experimental structure of the same protein · chain A against A, TM-score 0.71
  • 1THQ · Crystal structure of outer membrane enzyme pagp · an experimental structure of the same protein · chain A against A, TM-score 0.71
  • 1MM5 · Solution NMR structure of the outer membrane enzyme pagp in og micelles · an experimental structure of the same protein · chain A against A, TM-score 0.54
  • 1MM5 · Solution NMR structure of the outer membrane enzyme PagP in OG micelles · an experimental structure of the same protein · chain A against A, TM-score 0.54
  • 1MM4 · Solution NMR structure of the outer membrane enzyme PagP in DPC micelles · an experimental structure of the same protein · chain A against A, TM-score 0.49
  • 1MM4 · Solution NMR structure of the outer membrane enzyme pagp in dpc micelles · an experimental structure of the same protein · chain A against A, TM-score 0.49

Analyse

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