Research workbench
AlphaFold monomer V2.0 prediction for lipid a palmitoyltransferase pagp (P37001)
Analyse AlphaFold monomer V2.0 prediction for lipid a palmitoyltransferase pagp (P37001) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P37001
- Type
- protein
- Length
- 186 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB44F19a0cb161828322eEEd13F55d4C3C34938d2
- Molecule
- Lipid a palmitoyltransferase pagp
- UniProt
- P37001
- Pockets
- 1 · best druggability 0.68
Structure
1 distinct chain · 27% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lipid a palmitoyltransferase pagp | protein | 186 | 27% helix, 47% strand | P37001 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 215 | 0.68 | 0.85 | 39 | empty |
Compared structures
- 3GP6 · Crystal structure of pagp in SDS/MPD · an experimental structure of the same protein · chain A against A, TM-score 0.79
- 3GP6 · Crystal structure of PagP in SDS/MPD · an experimental structure of the same protein · chain A against A, TM-score 0.79
- 1THQ · Crystal Structure of Outer Membrane Enzyme PagP · an experimental structure of the same protein · chain A against A, TM-score 0.71
- 1THQ · Crystal structure of outer membrane enzyme pagp · an experimental structure of the same protein · chain A against A, TM-score 0.71
- 1MM5 · Solution NMR structure of the outer membrane enzyme pagp in og micelles · an experimental structure of the same protein · chain A against A, TM-score 0.54
- 1MM5 · Solution NMR structure of the outer membrane enzyme PagP in OG micelles · an experimental structure of the same protein · chain A against A, TM-score 0.54
- 1MM4 · Solution NMR structure of the outer membrane enzyme PagP in DPC micelles · an experimental structure of the same protein · chain A against A, TM-score 0.49
- 1MM4 · Solution NMR structure of the outer membrane enzyme pagp in dpc micelles · an experimental structure of the same protein · chain A against A, TM-score 0.49
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P37001
- Elsewhere: UniProt P37001 · AlphaFold DB P37001
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.