MolNFT v1 · #281955 · protein

AlphaFold monomer V2.0 prediction for rhodopsin (Q6W3E1)

Q6W3E1: “AlphaFold monomer V2.0 prediction for rhodopsin (Q6W3E1)”. 2 pockets (best druggability 0.80). MolNFT v1 #281955 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q6W3E1
Type: protein
Length: 348 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
Molecule: Rhodopsin
UniProt: Q6W3E1
Pockets: 2 · best druggability 0.80

Structure

1 distinct chain · 70% helix, 4% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Rhodopsin	protein	348	70% helix, 4% strand	Q6W3E1

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	111	0.80	0.98	28	empty
2	558	0.73	0.81	56	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6W3E1
Elsewhere: UniProt Q6W3E1 · AlphaFold DB Q6W3E1

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