MolNFT v1 · #268522 · protein
AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit 9 (Q56224)
Q56224: “AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit 9 (Q56224)”. 1 pocket (best druggability 0.26). MolNFT v1 #268522 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q56224
- Type
- protein
- Length
- 182 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x35612D34a32C306CA4fc1edA9360D1F717e25950
- Molecule
- NADH-quinone oxidoreductase subunit 9
- UniProt
- Q56224
- Pockets
- 1 · best druggability 0.26
Structure
1 distinct chain · 24% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-quinone oxidoreductase subunit 9 | protein | 182 | 24% helix, 19% strand | Q56224 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 53 | 0.26 | 0.73 | 17 | empty |
Compared structures
- 6Y11 · Respiratory complex I from thermus thermophilus · an experimental structure of the same protein · chain A against 9, TM-score 0.92
- 6Q8X · Respiratory complex I from thermus thermophilus with bound pyridaben. · an experimental structure of the same protein · chain A against 9, TM-score 0.92
- 4HEA · Crystal structure of the entire respiratory complex I from thermus thermophilus · an experimental structure of the same protein · chain A against 9, TM-score 0.92
- 4HEA · Crystal structure of the entire respiratory complex I from Thermus thermophilus · an experimental structure of the same protein · chain A against 9, TM-score 0.92
- 6Q8O · Respiratory complex I from thermus thermophilus with bound piericidin a · an experimental structure of the same protein · chain A against 9, TM-score 0.92
- 6Q8W · Respiratory complex I from thermus thermophilus with bound aureothin. · an experimental structure of the same protein · chain A against 9, TM-score 0.92
- 6I1P · Respiratory complex I from Thermus thermophilus with bound NADH · an experimental structure of the same protein · chain A against 9, TM-score 0.92
- 6I1P · Respiratory complex I from thermus thermophilus with bound NADH · an experimental structure of the same protein · chain A against 9, TM-score 0.92
- 6ZIY · Respiratory complex I from thermus thermophilus, NADH dataset, major state · an experimental structure of the same protein · chain A against 9, TM-score 0.92
- 6I0D · Respiratory complex I from Thermus thermophilus with bound Decyl-Ubiqui · an experimental structure of the same protein · chain A against 9, TM-score 0.91
- 6I0D · Respiratory complex I from thermus thermophilus with bound decyl- ubiquinone · an experimental structure of the same protein · chain A against 9, TM-score 0.91
- 6ZJL · Respiratory complex I from thermus thermophilus, NAD+ dataset, major state · an experimental structure of the same protein · chain A against 9, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q56224
- Elsewhere: UniProt Q56224 · AlphaFold DB Q56224
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