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MolNFT v1 · #264047 · protein

AlphaFold monomer V2.0 prediction for beta-nerve growth factor (P01138)

P01138: “AlphaFold monomer V2.0 prediction for beta-nerve growth factor (P01138)”. 2 pockets (best druggability 0.54). MolNFT v1 #264047 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession
P01138
Type
protein
Length
241 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0xEa58c7534E5701aA8370E0fAEb19b7e14653e69c
Molecule
Beta-nerve growth factor
UniProt
P01138
Pockets
2 · best druggability 0.54

Structure

1 distinct chain · 17% helix, 31% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ABeta-nerve growth factorprotein24117% helix, 31% strandP01138

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12210.540.7731empty
2660.400.8012empty

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

  • 5JZ7 · NGF IN COMPLEX WITH MEDI578 scFv · an experimental structure of the same protein · chain A against B, TM-score 0.42
  • 5JZ7 · Ngf in complex with MEDI578 scfv · an experimental structure of the same protein · chain A against A, TM-score 0.41
  • 1WWW · Ngf in complex with domain 5 of the trka receptor · an experimental structure of the same protein · chain A against W, TM-score 0.40
  • 1WWW · Ngf in complex with domain 5 of the trka receptor · an experimental structure of the same protein · chain A against W, TM-score 0.40
  • 2IFG · Structure of the extracellular segment of human trka in complex with nerve growth factor · an experimental structure of the same protein · chain A against F, TM-score 0.40
  • 2IFG · Structure of the extracellular segment of human TRKA in complex with nerve growth factor · an experimental structure of the same protein · chain A against F, TM-score 0.40
  • 4EDW · Nerve Growth Factor in Complex with Fab from humanized version of mouse mAb 911… · an experimental structure of the same protein · chain A against V, TM-score 0.40
  • 4EDW · Nerve growth factor in complex with Fab from humanized version of mouse mab 911… · an experimental structure of the same protein · chain A against V, TM-score 0.40
  • 4EDX · Nerve growth factor in complex with Fab from mouse mab 911 · an experimental structure of the same protein · chain A against W, TM-score 0.40

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