MolNFT v1 · #261233 · protein
AlphaFold monomer V2.0 prediction for NAD(P)H-quinone oxidoreductase subunit K (Q8DKZ4)
Q8DKZ4: “AlphaFold monomer V2.0 prediction for NAD(P)H-quinone oxidoreductase subunit K (Q8DKZ4)”. 2 pockets (best druggability 0.38). MolNFT v1 #261233 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8DKZ4
- Type
- protein
- Length
- 237 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB0dc1989C2D6236Adb8258225375f426A105483b
- Molecule
- NAD(P)H-quinone oxidoreductase subunit K
- UniProt
- Q8DKZ4
- Pockets
- 2 · best druggability 0.38
Structure
1 distinct chain · 39% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NAD(P)H-quinone oxidoreductase subunit K | protein | 237 | 39% helix, 8% strand | Q8DKZ4 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 71 | 0.38 | 0.78 | 14 | empty |
| 2 | 54 | 0.27 | 0.73 | 15 | empty |
Compared structures
- 6TJV · Structure of the NDH-1MS complex from Thermosynechococcus elongatus · an experimental structure of the same protein · chain A against K, TM-score 0.65
- 6TJV · Structure of the ndh-1MS complex from thermosynechococcus elongatus · an experimental structure of the same protein · chain A against K, TM-score 0.65
- 6KHJ · Supercomplex for electron transfer · an experimental structure of the same protein · chain A against K, TM-score 0.65
- 6KHJ · Supercomplex for electron transfer · an experimental structure of the same protein · chain A against K, TM-score 0.65
- 6KHI · Supercomplex for cylic electron transport in cyanobacteria · an experimental structure of the same protein · chain A against K, TM-score 0.65
- 6HUM · Structure of the photosynthetic complex I from thermosynechococcus elongatus · an experimental structure of the same protein · chain A against K, TM-score 0.65
- 6HUM · Structure of the photosynthetic complex I from Thermosynechococcus elongatus · an experimental structure of the same protein · chain A against K, TM-score 0.65
- 6NBX · T.elongatus NDH (data-set 2) · an experimental structure of the same protein · chain A against K, TM-score 0.64
- 6NBX · T.ELONGATUS ndh (data-set 2) · an experimental structure of the same protein · chain A against K, TM-score 0.64
- 6NBY · T.ELONGATUS ndh (composite model) · an experimental structure of the same protein · chain A against K, TM-score 0.64
- 6NBQ · T.ELONGATUS ndh (data-set 1) · an experimental structure of the same protein · chain A against K, TM-score 0.64
- 6L7O · Cryo-EM structure of cyanobacteria fd-ndh-1L complex · an experimental structure of the same protein · chain A against K, TM-score 0.64
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8DKZ4
- Elsewhere: UniProt Q8DKZ4 · AlphaFold DB Q8DKZ4
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