MolNFT v1 · #259350 · protein

AlphaFold monomer V2.0 prediction for periplasmic nitrate reductase, electron transfer subunit (Q53177)

Q53177: “AlphaFold monomer V2.0 prediction for periplasmic nitrate reductase, electron transfer subunit (Q53177)”. 2 pockets (best druggability 0.68). MolNFT v1 #259350 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q53177
Type: protein
Length: 154 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xd1A2963012bEcbC7A8f505464439Ab678C48936f
Molecule: Periplasmic nitrate reductase, electron transfer subunit
UniProt: Q53177
Pockets: 2 · best druggability 0.68

Structure

1 distinct chain · 23% helix, 8% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Periplasmic nitrate reductase, electron transfer subunit	protein	154	23% helix, 8% strand	Q53177

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	331	0.68	0.82	39	empty
2	54	0.28	0.74	18	empty

Compared structures

1OGY · Crystal structure of the heterodimeric nitrate reductase from rhodobacter sphaeroides · an experimental structure of the same protein · chain A against B, TM-score 0.75
1OGY · Crystal structure of the heterodimeric nitrate reductase from Rhodobacter sphaeroides · an experimental structure of the same protein · chain A against B, TM-score 0.75

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q53177
Elsewhere: UniProt Q53177 · AlphaFold DB Q53177

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.