MolNFT v1 · #255782 · protein
AlphaFold monomer V2.0 prediction for myrosinase MA1 (P29736)
P29736: “AlphaFold monomer V2.0 prediction for myrosinase MA1 (P29736)”. 2 pockets (best druggability 0.73). MolNFT v1 #255782 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P29736
- Type
- protein
- Length
- 501 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x56679c99FFEB4668142c4774dD42E1A30e9be883
- Molecule
- Myrosinase MA1
- UniProt
- P29736
- Pockets
- 2 · best druggability 0.73
Structure
1 distinct chain · 43% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Myrosinase MA1 | protein | 501 | 43% helix, 18% strand | P29736 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 584 | 0.73 | 0.80 | 49 | empty |
| 2 | 105 | 0.38 | 0.75 | 21 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 1DWJ · study on radiation damage on a cryocooled crystal. Refined part 6: structure after a… · an experimental structure of the same protein · chain A against M, TM-score 1.00
- 1DWJ · Study on radiation damage on a cryocooled crystal. refined part 6: structure after a… · an experimental structure of the same protein · chain A against M, TM-score 1.00
- 1E6X · MYROSINASE FROM SINAPIS ALBA with a bound transition state analogue,D-glucono-1,5-lactone · an experimental structure of the same protein · chain A against M, TM-score 1.00
- 1E6X · Myrosinase from sinapis alba with a bound transition state ANALOGUE,D- glucono-1,5-lactone · an experimental structure of the same protein · chain A against M, TM-score 1.00
- 1E73 · 2-F-glucosylated myrosinase from sinapis alba with bound L-ascorbate · an experimental structure of the same protein · chain A against M, TM-score 1.00
- 1E73 · 2-F-glucosylated MYROSINASE FROM SINAPIS ALBA with bound L-ascorbate · an experimental structure of the same protein · chain A against M, TM-score 1.00
- 1E71 · Myrosinase from sinapis alba with bound ascorbate · an experimental structure of the same protein · chain A against M, TM-score 1.00
- 1E71 · MYROSINASE FROM SINAPIS ALBA with bound ascorbate · an experimental structure of the same protein · chain A against M, TM-score 1.00
- 1E4M · Myrosinase from sinapis alba · an experimental structure of the same protein · chain A against M, TM-score 1.00
- 1E4M · Myrosinase from sinapis alba · an experimental structure of the same protein · chain A against M, TM-score 1.00
- 2WXD · A micromolar O-sulfated thiohydroximate inhibitor bound to plant myrosinase · an experimental structure of the same protein · chain A against M, TM-score 1.00
- 2WXD · A micromolar O-sulfated thiohydroximate inhibitor bound to plant myrosinase · an experimental structure of the same protein · chain A against M, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29736
- Elsewhere: UniProt P29736 · AlphaFold DB P29736
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