MolNFT v1 · #247806 · protein

AlphaFold monomer V2.0 prediction for methylthioribose-1-phosphate isomerase (Q9BV20)

Q9BV20: “AlphaFold monomer V2.0 prediction for methylthioribose-1-phosphate isomerase (Q9BV20)”. 4 pockets (best druggability 0.74). MolNFT v1 #247806 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q9BV20
Type: protein
Length: 369 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
Molecule: Methylthioribose-1-phosphate isomerase
UniProt: Q9BV20
Pockets: 4 · best druggability 0.74

Structure

1 distinct chain · 47% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Methylthioribose-1-phosphate isomerase	protein	369	47% helix, 17% strand	Q9BV20

Pockets

4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	76	0.74	0.97	29	empty
2	226	0.60	0.81	24	empty
3	83	0.31	0.73	13	empty
4	50	0.28	0.75	12	empty

Compared structures

4LDQ · Crystal Structure of the Mediator of Rho Dependent Invasion · an experimental structure of the same protein · chain A against B, TM-score 0.88
4LDQ · Crystal structure of the mediator of rho dependent invasion · an experimental structure of the same protein · chain A against B, TM-score 0.88
4LDR · Structure of the S283Y mutant of mrdi · an experimental structure of the same protein · chain A against B, TM-score 0.88
4LDR · Structure of the S283Y mutant of MRDI · an experimental structure of the same protein · chain A against B, TM-score 0.88

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9BV20
Elsewhere: UniProt Q9BV20 · AlphaFold DB Q9BV20

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