Research workbench
AlphaFold monomer V2.0 prediction for methylthioribose-1-phosphate isomerase (Q9BV20)
Analyse AlphaFold monomer V2.0 prediction for methylthioribose-1-phosphate isomerase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9BV20
- Type
- protein
- Length
- 369 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- Methylthioribose-1-phosphate isomerase
- UniProt
- Q9BV20
- Pockets
- 4 · best druggability 0.74
Structure
1 distinct chain · 47% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methylthioribose-1-phosphate isomerase | protein | 369 | 47% helix, 17% strand | Q9BV20 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 76 | 0.74 | 0.97 | 29 | empty |
| 2 | 226 | 0.60 | 0.81 | 24 | empty |
| 3 | 83 | 0.31 | 0.73 | 13 | empty |
| 4 | 50 | 0.28 | 0.75 | 12 | empty |
Compared structures
- 4LDQ · Crystal Structure of the Mediator of Rho Dependent Invasion · an experimental structure of the same protein · chain A against B, TM-score 0.88
- 4LDQ · Crystal structure of the mediator of rho dependent invasion · an experimental structure of the same protein · chain A against B, TM-score 0.88
- 4LDR · Structure of the S283Y mutant of mrdi · an experimental structure of the same protein · chain A against B, TM-score 0.88
- 4LDR · Structure of the S283Y mutant of MRDI · an experimental structure of the same protein · chain A against B, TM-score 0.88
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9BV20
- Elsewhere: UniProt Q9BV20 · AlphaFold DB Q9BV20
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.