MolNFT v1 · #244299 · protein
AlphaFold monomer V2.0 prediction for 2-ketoarginine methyltransferase (D5FKJ3)
D5FKJ3: “AlphaFold monomer V2.0 prediction for 2-ketoarginine methyltransferase (D5FKJ3)”. 3 pockets (best druggability 0.75). MolNFT v1 #244299 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- D5FKJ3
- Type
- protein
- Length
- 350 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4a689cCb8B548104f45568fF88692AEd958A42D9
- Molecule
- 2-ketoarginine methyltransferase
- UniProt
- D5FKJ3
- Pockets
- 3 · best druggability 0.75
Structure
1 distinct chain · 53% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 2-ketoarginine methyltransferase | protein | 350 | 53% helix, 15% strand | D5FKJ3 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 391 | 0.75 | 0.85 | 55 | empty |
| 2 | 200 | 0.49 | 0.75 | 29 | empty |
| 3 | 88 | 0.31 | 0.72 | 19 | empty |
Compared structures
- 8RWM · Crystal structure of selenomethionine derivatized alpha keto acid C-methyl-transferases… · an experimental structure of the same protein · chain A against B, TM-score 0.95
- 8RVC · Crystal structure of alpha keto acid C-methyl-transferases MrsA bound to ketoarginine · an experimental structure of the same protein · chain A against B, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D5FKJ3
- Elsewhere: UniProt D5FKJ3 · AlphaFold DB D5FKJ3
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